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SRX1838977: Whole Genome Sequencing of pig whipworm
1 ILLUMINA (Illumina HiSeq 2000) run: 37.4M spots, 7.5G bases, 4.6Gb downloads

Design: Illumina sequencing of Trichuris suis Genome sequencing 2883035872 fragment RNA-Seq library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Trichuris suis Genome sequencing and assembly
show Abstracthide Abstract
The intestine whipworm Trichuris suis, is commonly found in porcine intestinal track, causing diarrhea, anorexia, anemia, poor growth, dehydration, and emaciation. Following these initial symptoms, secondary infections can set in and cause death. The whipworm can colonize humans but after a limited time is cleared from the individual without causing infection. Trichuris suis ova have been studied as a potential treatment for auto-immune disease such as Crohn's disease through the repression of Th1 response.
Sample:
SAMN05235186 • SRS1498186 • All experiments • All runs
Organism: Trichuris suis
Library:
Name: 2883556286
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: SINGLE
Spot descriptor:
forward101  reverse

Runs: 1 run, 37.4M spots, 7.5G bases, 4.6Gb
Run# of Spots# of BasesSizePublished
SRR365991037,379,0687.5G4.6Gb2016-12-14

ID:
2628574

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